BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E11SP1|AL425719
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1319 1061 0.0
3x_Contig830 220 3e-57
3x_Contig1381 105 1e-22
>3x_Contig1319
Length = 7600
Score = 1061 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Minus
Query: 246 caaaatccacgtcatcgtctgaactagtactcgaactgtcgctatcatcatcgtcatcat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7600 caaaatccacgtcatcgtctgaactagtactcgaactgtcgctatcatcatcgtcatcat 7541
Query: 306 cgtcatcgtcatcatcatcatcatcatcatcatcatcatcatcgtcatcatctactgcca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7540 cgtcatcgtcatcatcatcatcatcatcatcatcatcatcatcgtcatcatctactgcca 7481
Query: 366 ttgtacctccttcatcctccgagagagactggtagtctgaagacgctgtagcactgtccg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7480 ttgtacctccttcatcctccgagagagactggtagtctgaagacgctgtagcactgtccg 7421
Query: 426 aacctgatgtgatggctgagtcctgattcgttgatatcagctttccgttcttacccatcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7420 aacctgatgtgatggctgagtcctgattcgttgatatcagctttccgttcttacccatcg 7361
Query: 486 cattcgaagatcgaccttttagcttagttccggctttgggattcttatataacggtaact 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7360 cattcgaagatcgaccttttagcttagttccggctttgggattcttatataacggtaact 7301
Query: 546 tggacaaattcgagcccctgctgttcgaatcctgtggtatatcactcagcgacgaatcac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7300 tggacaaattcgagcccctgctgttcgaatcctgtggtatatcactcagcgacgaatcac 7241
Query: 606 tagaatatattagactgaaacgtctcggtctagaacttaaatgcggaggcttatccttct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7240 tagaatatattagactgaaacgtctcggtctagaacttaaatgcggaggcttatccttct 7181
Query: 666 tatttcccattttatcctgtaacgctttcagagtcgtaggcttcttcccactagttaact 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7180 tatttcccattttatcctgtaacgctttcagagtcgtaggcttcttcccactagttaact 7121
Query: 726 tcctcgggcttttacctgacataatatatatgtgttatcagttgcaattagcagc 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7120 tcctcgggcttttacctgacataatatatatgtgttatcagttgcaattagcagc 7066
>3x_Contig830
Length = 3109
Score = 220 bits (111), Expect = 3e-57
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 1 gatcccatcgtcgcctttgaaattgaatgacagttcaggagcatctgatagttcagagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gatcccatcgtcgcctttgaaattgaatgacagttcaggagcatctgatagttcagagct 52
Query: 61 tgaaatgtcctcatcattcgaatccgaagcttcacgattctgctgagccct 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tgaaatgtcctcatcattcgaatccgaagcttcacgattctgctgagccct 1
>3x_Contig1381
Length = 7318
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 289 atcatcatcgtcatcatcgtcatcgtcatcatcatcatcatcatcatcatcatcatcatc 348
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5299 atcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatc 5240
Query: 349 gtcatcatc 357
||||||||
Sbjct: 5239 atcatcatc 5231
Score = 105 bits (53), Expect = 1e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 289 atcatcatcgtcatcatcgtcatcgtcatcatcatcatcatcatcatcatcatcatcatc 348
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5302 atcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatc 5243
Query: 349 gtcatcatc 357
||||||||
Sbjct: 5242 atcatcatc 5234
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 290 tcatcatcgtcatcatcgtcatcgtcatcatcatcatcatcatcatcatcatcatcatcg 349
|||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5304 tcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatca 5245
Query: 350 tcatcatc 357
||||||||
Sbjct: 5244 tcatcatc 5237
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 289 atcatcatcgtcatcatcgtcatcgtcatcatcatcatcatcatcatcatcatcatcatc 348
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5296 atcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatc 5237
Query: 349 gtcatcat 356
|||||||
Sbjct: 5236 atcatcat 5229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8053
Number of Sequences: 1807
Number of extensions: 8053
Number of successful extensions: 1030
Number of sequences better than 1.0e-20: 3
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)